Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKISFSESQKLFAYFSGLIAALSLFIYYVSAQQSEGALILCITFGVIAAGIWFGPIYALAVTLIVLFVLGTLMMFFQTGQTSLFPAEEGLRMLVVWGIALLLFSFISGRIHDITAELRRSMTRLQSEIKSYVAVDRVTGFDNKQRMKLELSEEIKRAERYGNSFVFLLLHMHYFKEFKSLYGEKETDRLFQYVGQQIRTSVRETDKKFRPSDERIGIVLTHTPAEHMPAVLTKLKKQLDTYQLE--NGKYVSLTFHVCYLPYRNDIQTADQFLEELENEMMMNEL
4ZVF Chain:A ((1-148))-------------------------------------------------------------------------------------------------------------------------------------MDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDKFKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAERIRSRVEKTKLKAANGEDIALSLSIGAAMFNG-HPDYERLIQIADEALYI---


General information:
TITO was launched using:
RESULT:

Template: 4ZVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 618 -100367 -162.41 -687.45
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -162.41
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.613

(partial model without unconserved sides chains):
PDB file : Tito_4ZVF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZVF-query.scw
PDB file : Tito_Scwrl_4ZVF.pdb: