Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRRSCLMIRRRKRMFTAVTLLVLLVMGTSVCPVKAEGAARQMEALNRGLVAVKTDGGIFVSWRFLGTENASVLFNVYRDGQKLNAAPVKTTNYVDKNGSAGSTYTVRAVVNGTEQPASEKASVWAQPYHSVPLDKPAGGTTPKGESYTYSANDASVGDVDGDGQYELILKWDPSNSKDNSQDGYTGDVLIDAYKLDGTKLWRINLGKNIRAGAHYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPEYLTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIAYLDG-QRPSLIMTRGYYAKTMLVAYNFRD-GKLSK--LWTLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGS----MAVDHDGKGMYSTG--L------------GHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYA----------G--KDVGRGMAADIDPRYPGQEVWANG----SLYSAKGVKIGSG---------------VPSSTNFGIWWDGDLLREQLDSNRIDKWDYQNGVSKNMLTASGAAANNGTKATPTLQADLLGDWREEVVWRTEDSSALRIYTTTIPTEHRLYTLMHDPVYRLGIAWQNIAYNQPPHTSFFLGDGMAEQPKPNMYTP
4TQJ Chain:A ((119-358))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYLADIRKTGRADIIGFGEK----GVLVSRNNGGLNFGPATLVLKDFGYDA--GGWRLDRHLRFLADVTGNGHLDIVGFGDKHVFISRNNGDGTFAPAKSVIDNFCIDAGGWKIGDHPRFVADLTGDGT-ADIIGCGKA-----GCWVALN-NGGGVFGQVKLVINDFGTDKGWQAAKHPRFIADLTGNGR-GDVVGFGNAGVYVALNNGDGTFQSAKLVLKDFGVQQGWTVSKHRRFVVDLTGDGCADIIGFG-----------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4TQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 880 -59757 -67.91 -319.56
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -67.91
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.444

(partial model without unconserved sides chains):
PDB file : Tito_4TQJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TQJ-query.scw
PDB file : Tito_Scwrl_4TQJ.pdb: