Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKRETFNETFLKAARGEKADHTPVWYMRQAGRSQPEYRKLK-EKYGLFEITHQPELCAYVTRLPVEQYGVDAAILYKDIMTPLPSIGVDVEIKNGIGPVIDQPIRSLADIEKLGQIDPEQDVPYVLETIKLLVNEQ-LNVPLIGFSGAPFTLASYMIEG--G---PSKNYNKTKA-FMYSMPDAWNLLMSKLADMIIVYVKAQIEAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAK-E---N-VPLIMFGVGASHLAGDWHDLPLDVVGLDWRLGIDEARSK-GITKTVQGNLDPSILLAP-WEVIEQKTKEILDQGM---ESDGFIFNLGHGVFPDVSPEVLKKLTAFVHEYSQNKKMGQYS
4ZR8 Chain:A ((11-363))----TLKNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAG--LSLCKNTEFACEVTLQPLRRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKADLDYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRF------TKQMMYAQPEVLHALLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMKKIIAGLQREKDGRRIPVIVFTKGG-GQWLEPMITTGADALGLDWTTPLNTARTTVAGRVALQGNLDPAVL-YGSAASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVHEYSAKY------


General information:
TITO was launched using:
RESULT:

Template: 4ZR8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1943 -227087 -116.87 -681.94
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -116.87
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.532

(partial model without unconserved sides chains):
PDB file : Tito_4ZR8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZR8-query.scw
PDB file : Tito_Scwrl_4ZR8.pdb: