Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------------------------------------MDKTSLIGIILAFVAL------SVGMVLKGVSFSALANPAAILIIIAGTISAVVIAFPTKEIKKVPTLFRVLFKENKQLTIEELIPMFSEWA------QLARREGLLALEASIEDVDDAFLKNGLSMAVDGQSAEFIRDIMTEE-VEAMEDRHQAGAAIFTQAGTYAPTLGV---------LGAVIGLIA-ALSHMDNT-DELGHAISAAFVATL-LGIFTGYVL------WHPFANKL-KRKSKQEVKLREVMIEGVLSVLEGQAPKVIEQ-----KLLM--------------YLPAKDRLKFAEQGEAQNGEKKEEEA--------------------------
4KK0 Chain:A ((2-431))PLQSLVKALWNVLHEPDLTELIAEVESYQQRYPKQNPTNSQKIRHILDEIYEKTPFNNTRRRILWLAVLKTVIPLLILDRQAVGEWWDQIFFPFLNSPTQLKPVFSDLKSILFYILIFHDEDEWGGDLR---RECAEETITRLVDLYVSKAIENLESQEQRNQTIECLVNVLVHYGIQRPKELSSCFCHHFLNPPTRIPILSVMVEVIR-RQGPRLYEIPQTGFYDLVLKCAEFDTSPILLSYALSFILMILSHICNSLDDSLYRLFCIYLRFSMIDPTSGFPSSTASGNWEVF-HDFMSTGSSQPDYLESLDYSQLFSILYALYPINFLEFLRDPKLYASKHNFQIRYSFNQELLSTKSDGLLGRHLAHSNFLKYTAETELTDKSRWTRLDSIAVVALCNSLNAV


General information:
TITO was launched using:
RESULT:

Template: 4KK0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 976 -151791 -155.52 -572.80
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -155.52
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.370

(partial model without unconserved sides chains):
PDB file : Tito_4KK0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KK0-query.scw
PDB file : Tito_Scwrl_4KK0.pdb: