Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQKAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSKKTSNDEPLVKGADIPVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRGHRELPIRADYIGKNIPTSKSEKVMVQLDEVDQNDLVAIYENE
2IGB Chain:B ((2-179))--QKAVVMDEQAIRRALTRIAHEIIERNKGIDGCVLVGIKTRGIYLARRLAERIEQIEGASVPVGELDITLYRD------DDHEPLVKGTNVPFPVTERNVILVDDVLFTGRTVRAAMDAVMDLGRPARIQLAVLVDRGHRELPIRADFVGKNVPTSRSELIVVELSEVDGIDQVSIHEK-


General information:
TITO was launched using:
RESULT:

Template: 2IGB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 888 -126833 -142.83 -737.40
target 2D structure prediction score : 0.77
Monomeric hydrophicity matching model chain B : 0.94

3D Compatibility (PKB) : -142.83
2D Compatibility (Sec. Struct. Predict.) : 0.77
1D Compatibility (Hydrophobicity) : 0.94
QMean score : 0.642

(partial model without unconserved sides chains):
PDB file : Tito_2IGB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2IGB-query.scw
PDB file : Tito_Scwrl_2IGB.pdb: