Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIKKFTAASMQEAALLIRKELGNEAVILNSKKIKKRKWFGLVNKPAVEVIAVLDQDFLEKKTPQKAAEPKQTLKTPVSSPKIEERTYPPQIPAQQELGDFSAYQSVLPEPLRKAEKLLQETGIKESTKTNTLKKLLRFSVEAGGLTEENVVGKLQEILCDMLPSADKWQEPIHSKYIVLFGSTGAGKTTTLAKLAAISMLEKH-KKIAFITTDTYRIAAVEQLKTYAELL----------QAPLEVCYTKEEFQQAKELFSEYDHVFVDTAGRNFKDPQYIDELKETIPFESSIQSFLVLSATAKYEDMKHIVKRFS-SVPVNQYIFTKIDETTSLGSVFNILAESKIGVGFMTNGQNVPEDIQTVSPLGFVRMLCR
4C7O Chain:C ((103-262))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLMAGLQGAGKTTSVGKLGKF-LREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAA--LKEAKLKF--YDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTG-QDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSI-----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4C7O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 705 -86975 -123.37 -587.67
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain C : 0.65

3D Compatibility (PKB) : -123.37
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.590

(partial model without unconserved sides chains):
PDB file : Tito_4C7O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4C7O-query.scw
PDB file : Tito_Scwrl_4C7O.pdb: