Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNTYVVD-------DSKYKCIYAGTEKAAAFNNEFENGTRVRVWFEGHHIKTFEKEQREVCGVGE----------------------WIVKYDAATELQKEVNRLEKTY--FKKKELLDTIRQADGVGREINEKKKSILNYSGC
1WMM Chain:A ((1-145))MTYWICITNRENWEVIKRHNVWGVPKKHKNTLSRVKPGDKLVIYVRQEKDKEGNLLEPKIVGIYEVTSEPYVDFSRIFKPGGKETYPYRVKIKPIKIGEINFKPLINDLKFIKNKKRWSMHFFGKA-MRELPEEDYKLIEKLLL


General information:
TITO was launched using:
RESULT:

Template: 1WMM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 442 30730 69.52 274.38
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 69.52
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.311

(partial model without unconserved sides chains):
PDB file : Tito_1WMM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1WMM-query.scw
PDB file : Tito_Scwrl_1WMM.pdb: