Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence ----------------------MNKWKRLFFILLAINFIL--AAGFVALVLLPGEQAQVKDASESEYGFQVTSTKESLAAFVNSYLNDKASNKLDYKVEIDDDVHVAGKIKAFSTSIDAFIAFEPTVKKNGDVELNVTKFSLGKLSIPISFVLNYMDSFYELPSFVHVHPGDKSIEVRL---SEMPLTNGMYVKA----------------------DKINLEKDEIEF---SYYHPKQ 1J1T Chain:A ((6-233)) STIPSSITSGSIFDLEGDNPNPLVDDSTLVFVPLEAQHITPNGNGWRHEYKVKESLRVAMTQTYEVFEATVKVEMSDGGKTIISQHHASDTGTISKVYVSDTDESGFNDSVANNGIFDVYVRLR-------NTSGNEEKFALGTMTSGETFNLRVVNNY----GDVEVTAFGNSFGIPVEDDSQSYFKFGNYLQSQDPYTLDKCGEAGNSNSFKNCFEDLGITESKVTMTNVTYTRETN

General information: TITO was launched using: RESULT: Template: 1J1T.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 865 44532 51.48 253.02 target 2D structure prediction score : 0.41 Monomeric hydrophicity matching model chain A : 0.64 3D Compatibility (PKB) : 51.48 2D Compatibility (Sec. Struct. Predict.) : 0.41 1D Compatibility (Hydrophobicity) : 0.64 QMean score : 0.207

(partial model without unconserved sides chains): PDB file : Tito_1J1T.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1J1T-query.scw PDB file : Tito_Scwrl_1J1T.pdb: