Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLRPHLKIEAKGTGSVSFFSEDWLTAQQARTFARELGRFPYMKELEFEDEKGGSWTLKELEKLTEELAQEPDDITVYFDGSFDKESE---LAGLGIVIYYSLGGTRHRLRKNKSFR-LKTNNEAEYAALYEAIREVRELGASRNSITIKGDSLVVLNQLDGS--------WPCY---DPSHNEWLDKIEALLESLKLTPTYETIQRK----DNQEADGLAKKILSHQFVESHTKLDRNGDDDIG
2QKB Chain:A ((4-152))----------------------------------------------------------------------MGDFVVVYTDGCCSSNGRRRPRAGIGVYWGPGH--P-L--NVGIRLPGRQTNQRAEIHAACKAIEQAKTQNI--NKLVLYTNSMFTINGITNWVQGWKKNGWKTSAGKEVINKEDFVALERLTQGM--DIQWMHVPGHSGFIGNEEADRLAREGAKQS-----------------


General information:
TITO was launched using:
RESULT:

Template: 2QKB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 588 -2296 -3.90 -17.66
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -3.90
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.414

(partial model without unconserved sides chains):
PDB file : Tito_2QKB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QKB-query.scw
PDB file : Tito_Scwrl_2QKB.pdb: