Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKQQFIDMQEQGTSTIPNLLLTHYKQLGLNETELILLLKIKMHLEKGSYFPTPNQLQEGMSISVEECTNRLRMFIQKGFLFIEECEDQNGIKFEKYSLQPLWGKLYEYIQLAQNQTQERKAEGEQKSLYTIFEEEFARPLSPLECETLAIWQDQDQHDAQLIKHALKEAVLSGKLSFRYIDRILFEWKKNGLKTVEQAKIHSQKFRRVQAKQNEPQKEYKRQVPFYNWLEQ
3ZMD Chain:A ((57-115))-------------------------QPFGLTMNDYEILVNLSESE-GD--RMRMSDLATATMQSKSRLSHQITRMENANLVRRENCE-------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3ZMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 148 -22798 -154.04 -386.40
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -154.04
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.686

(partial model without unconserved sides chains):
PDB file : Tito_3ZMD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ZMD-query.scw
PDB file : Tito_Scwrl_3ZMD.pdb: