Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNEFMKKFSLTKPIIQAPMAGGITKPRLASAVSNQGALGSLASGYLTPDLLEQQIKEIFELTDAPFQINVFVPLGLEMPPKDQIKKWKENIPLANQVNQFTSVQEEWDDFYQKIDLILKYKVKACSFTFDLPPEDAVKELKTAGCCLIGTASTVEEALLMEERGMDIVVLQGSEAGGHRGAFLPSKGESAVGLMALIPQAADALSVPVIAAGGMIDHRGVKAALTLGAQGVQIGSAFLICHESNAHPVHKQKILEANEADTKLTTLFSGKEARGIVNKWMEENEQFETQTL--PYP--YQNTLTKAMRQKASLQNNHDQMSLWAGQGIRSLTEEISVKQLLNQLCQEDIKI
2Z6I Chain:A ((2-308))KTRITELLKIDYPIFQGGMA-WVADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSLTDKPFGVNIMLLSPF---------------------------------VEDIVDLVIEEGVKVVTTGAGNP-SKYMERFHEAGIIVIPVVPSVALAKRMEKIGADAVIAEGMEAGGHIGK---------LTTMTLVRQVATAISIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKESNAHPNYKEKILKARDIDTTISAQHFGHAVRAIKNQLTRDFELAEKDAFKQ-DLEIFEQMGAGALAKAVV-HGDVDGGSVMAGQIAGLVSKEETAEEILKDLYYGAAK-


General information:
TITO was launched using:
RESULT:

Template: 2Z6I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1909 -160559 -84.11 -535.20
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -84.11
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.499

(partial model without unconserved sides chains):
PDB file : Tito_2Z6I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Z6I-query.scw
PDB file : Tito_Scwrl_2Z6I.pdb: