Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIGFFDSGIGGMTVLYEAIKVLPYEDYIFYADTLNVPYGEKSKGKVKEYIFNAAEFLASQNIKALVIACNTATSIAIEDLRRNFDFPIIG-IEPAVKPAINKCTEERKRVLVVATNLTLKEEKFHNLVKEIDHHD---LVDCLALPGLVEFAENFDFSEDKIIKYLKNELSSFDLKQYGTIVLGCTHFPFFKNSFEKLFGIKVDMISGSVGTAKQLKKVLADRNQLGKGSGSITFFNSGHKIVDQEVISKYKRLFEILDETQRSHVGH
3UHF Chain:B ((25-237))MKIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEALDFFEQFQIDMLIIACNTASAYALDALRAKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIKSEEYQKRLLSQGYTNINALATGLFVPMVEEGIFEGDFLQSAMEYYFKN-ITTPD-----ALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLKE--------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3UHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1190 -148356 -124.67 -709.84
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : -124.67
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.556

(partial model without unconserved sides chains):
PDB file : Tito_3UHF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UHF-query.scw
PDB file : Tito_Scwrl_3UHF.pdb: