Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNAISLAVDQFVAVLTIHNPPA-NALSSRILEELSSCLDQCETDAGVRSIIIHGEGRFFSAGADIKEFTSLKGNE--DSSLLAERGQQLMERIESFPKPIIAAIHGAALGGGLELAMACHIRIAAEDAKLGLPELNLGIIPGFAGTQRLPRYVGTAKALELIGSGEPISGKEALDLGLVS--IGAKDEAEVIEKAKALAAKFAEKSPQTLASLLELLYSNKVYSYEGSLK----LEAKRFGEAFESEDAKEGIQAFLEKRKPQFKGE
3Q0J Chain:D ((12-255))--------DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWG-----KLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADD---LLTEARATATTISQMS----ASAARMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQF---


General information:
TITO was launched using:
RESULT:

Template: 3Q0J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1140 -14333 -12.57 -60.99
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain D : 0.80

3D Compatibility (PKB) : -12.57
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.514

(partial model without unconserved sides chains):
PDB file : Tito_3Q0J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3Q0J-query.scw
PDB file : Tito_Scwrl_3Q0J.pdb: