Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALNKPKIVILGAGYGGLMTVTRLTKYVGPNDADITLVNKHNYHYETTWMHEASAGTLHHDRCRYQIKDVINQSRVNFVQDTVKAIKIDEKKVVLA--NG---ELQYDYLVIGLGAVPETFGIKGLKEYAFPIANINTSRLLREHIELQFATYNTEAEKRPDRLTIVVGGAGFT-------------------------GIEFLGELAARVPELCKEYDVDRSLVRIICVEAAPTVLPGFDPELVDYAVHYLEENGVEFKIGTAVQECTPEGVRVGKKDEEPEQIKSQTVVWAAGVRGHPIVEEAGFE--NMRGRVKVNPDLRAPGHDNVFILGDSSLFMNEDTERPYPPTAQIAMQQGITVAKNLGRLIKGG-ELEEFKPDIKGTVASLGE-HNAVGVVYGRKLKGTPASFMKKVIDNRSLFMIGGLGLTLKKGKFKFF
3H8L Chain:A ((2-357))-----TKVLVLGGRFGALTAAYTLKRLVG-SKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESF------------QGGNIAI-GSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKK----GML-DKVHVTVFSPGE-YLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREHEIVDEK----GNTIPADITILLPPYTGNPALKNSTPDLVDDGGFIPTDLNMVSIKYDNVYAVGDANSMT-------VPKLGYLAVMTGRIAAQHLANRLGVPTKVDKYYPTIVCVA-DNPYE-----------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3H8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1782 -52648 -29.54 -163.50
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -29.54
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.580

(partial model without unconserved sides chains):
PDB file : Tito_3H8L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3H8L-query.scw
PDB file : Tito_Scwrl_3H8L.pdb: