Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----MAKKDEHLRKPEWLKIKLNTNENYTGLKKLMRENNLHTVCEEAKCPNIHECWAVRRTATFMILGSVCTRACRFCAVKTGLPTE---LDLQEPERVADSVALMNLKHAVITAVARDDQKDGGAGIFAETVRAIRRKSPFTTIEVLPSDMGGNYDNLKTLMDTRPDILNHNIETV-RRLTPRVRARATYDRSLEFLRRAKEMQPDIPTKSSIMIGLGETKEEIIEVMDDLLANNVDIMAIGQYLQP---------------TKKHLKVQKYYHPDEF---------AELKEIAMQKG------------------FSHCEAGPLVRSSYHADEQVNEASKKRQAQA------
3T7V Chain:A ((12-348))SLGDKVIEGYQLTDNDLRTLLSLES--------KEGLERLYSAARKVRDHYFGNRVFLNCFIYFS---TYCKNQCSFCYYNCRNEINRYRLTMEEIKETCKTLKGAGFHMVDLTM-GEDPYYYEDPNRFVELVQIVKEELGLP---IMISPGLMDNATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQ--GYCVEDGILTGVGNDIESTILSLRGMSTNDPDMVRVMTFLPQEGTPLEGFRDKSNLSELKIISVLRLMFPKRLIPASLDLEGIDGMVLRLNAGANIVTSILPPDSQLEGVANYDRDLEERDRDIKSVVRRLEIMGMKPARQADFEAVL


General information:
TITO was launched using:
RESULT:

Template: 3T7V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1418 49375 34.82 175.71
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 34.82
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.311

(partial model without unconserved sides chains):
PDB file : Tito_3T7V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3T7V-query.scw
PDB file : Tito_Scwrl_3T7V.pdb: