Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKMLLFLIIAAVSMLTIAGCSSQSSSADGKVTLKFFHRWPKEPEKSYFEEVVKEFEKDHPDIDIQIEAVLN---DSYKDKIKVMLGTTSPPDIYFSWSD-EFAFKFIRGNKALDLSSYYKNDTDWSSQLVQSQITPFTYENKQYGVPWQMD-AKSFFYNKDIFQKLNLDPPKTWDELIDVSKKLKEHGY-TPISFGTKATWTISHYIGTLNQRMVDEKTREKDYNAKTGEFTDEGYVKALEKLQELMPYFNKHVNSVDHEYVRQQFKSGKSAMIYAETAEI-KLVE------PVNLGMFPFPEISGQKGSSEALTGAPEGFMISSRTKHPKEAMEFLQFLTSKRMGEKLVKDVGKYSAVQGTATEENATAIQREAVQHIVDAKSMVPW-FDMDVDVEVADAYLTGVQQMLGGDMTPQQVMKAVQKAAKQVRASAE
2B3F Chain:A ((1-391))-------------------------------MKLEIFSWWAG-DEGPALEALIRLYKQKYPGVEVINATVTGGAGVNARAVLKTRMLGGDPPDTFQVHAGMELIGTWVVANRMEDLSALFRQEG-WLQAFPKGLIDLISYKGGIWSVPVNIHRSNVMWYLPAKLKGWGVNPPRTWDKFLATCQTLKQKGLEAPLALGE--NWTQQHLWESVALAVLGPDDWNNLWNGK-LKFTDPKAVRAWEVFGRVLDCANKDAAGLSWQQAVDRVVQGKAAFNIMGDWAAGYMTTTLKLKPGTDFAWAPSPGTQG-V---FMML--SDSFGLPKGAKNRQNAINWLRLVGSKEGQDTSNPLKGSIAARLDSDPSK-YNAYGQSAMRDWRSNRIVGSLVHGAVAPESFMSQFGTVMEIFL-QTRNPQAAANAAQAIADQVGLGR-


General information:
TITO was launched using:
RESULT:

Template: 2B3F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2244 56004 24.96 148.55
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : 24.96
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.482

(partial model without unconserved sides chains):
PDB file : Tito_2B3F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2B3F-query.scw
PDB file : Tito_Scwrl_2B3F.pdb: