Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNVPFWTEEHVRATLPERDAESHKGTYGTALLLAGSDDMPGAALLAGLGAMRSGLGKLVIGTSENVIPLIVPVLPEATYWRDGWKKAA-DA-QLEETYRAIAIGPGLPQTESVQQAVDHVLTADCPVILDAGALAKRTY-PKREGPVILTPHPGEFFRMTGVPVNELQKKRAEYAKEWAAQLQTVIVLKGNQTVIAFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHEDPKHAVLNAVYLHGACAELWTDEHSAHTLLAHELSDILPRVWKRFE
3RPZ Chain:A ((4-278))MNVPFWTEEHVRATLPERDAESHKGTYGTALLLAGSDDMPGAALLAGLGAMRSGLGKLVIGTSENVIPLIVPVLPEATYWR--DGWKKAADAQLEETYRAIAIGPGLPQTESVQQAVDHVLTADCPVILDAGALAKRTYPKR-EGPVILTPHPGEFFRMTGVPVNELQKKRAEYAKEWAAQLQTVIVLKGNQTVIAFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHEDPKHAVLNAVYLHGACAELWTDEHSAHTLLAHELSDILPRVWKRF-


General information:
TITO was launched using:
RESULT:

Template: 3RPZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1698 -86920 -51.19 -319.56
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.97

3D Compatibility (PKB) : -51.19
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.97
QMean score : 0.617

(partial model without unconserved sides chains):
PDB file : Tito_3RPZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RPZ-query.scw
PDB file : Tito_Scwrl_3RPZ.pdb: