Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYVRHLGLRDFRSWA-CVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPLIRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPEDLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVFDTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASMDVTGPSEQSDIDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAWSLAVALRLAAYQLLRVDGGEPVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVLEDIPAGWDARRVHIDVRADDTGSMSVVLP |
1E69 Chain:A ((1-1164)) | MRLKKLYLKGFKSFGRPSLIGFSDRVTAIVGPNGSGKSNIIDAIKWVFGEKFDMIFAGSEN-LPPAGSAYVELVFEENGEEITVARELKRTGENTYYLNGSPVR-LKDIRDRFAGTGLGVDFYSIVGQGQIDRIV-----------------------------------------------------------------------------------------------------------NAYQRVNESFNRFISLLFFGGEGRLEISIRKPGRRDQKLSL----------LSGGEKALVGLALLFALMEI----KPSPFYVLDEVDSPLDDYNAERFKRLLKENSKHTQFIVITHNKIVMEAADLLHGVTMVNGVSAIVPVEV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1E69.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -107124 for 2051 contacts (-52.2/contact) +
2D Compatibility (PS) -28192 + (NN) -10278 + (LL) 9196
1D Compatibility (HY) -7200 + (ID) 2700
Total energy: -146298.0 ( -71.33 by residue)
QMean score : 0.477
|
|
|