Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------MTTRLQAPVAVTPPLPTRRNAELLLLCFAAVITFAALLVVQANQDQGV-PWDLTSYGLAFLTLFGSAHLAIRRFAPYTDPLLLPVVALLN-------GLGLVMIHRL--DLVDNEIGEHRHPSANQQ-------MLWTLVGVAAFALVVTFLKDHRQLARYGYICG-LAGLVFLAVPALLPAALSEQNGAKIWIRLPGFSIQPAEFSKILLLIFFSAVLVAKRGLFTSAGKHLLGMTLPRPRDLAPLLAAWVISVGVMVFEKDLGASLLLYTSFLVVVYLATQRFSWVVIGLTLFAAGTLVAYFIFEHVRLRVQTWLDPFADPDGTGYQIVQSLFSFATGGIFGTGLGNGQPDTVPAASTDFIIAAFGEELGLVGLTAILMLYTIVIIRGLRTAIATRDSFGKLLAAGLSSTL---AIQLFIVVGGVTRLIPLTGLTTPWMSYGGSSLLANY--ILLAILARISHGARRPLRTRPRNKSPITAAG--TEVIERV-- |
| 3M6A Chain:A ((7-531)) | TGEVQTLTEKIEEAGMPDHVKETALKELNRYEKIPSSSAESSVIRNYIDWLVALPWTDETDDKLDLKEAGRLLDEEHHGLEKVKERILEYLAVQKL---TKSLKGPILCLAGPPGVGKTSLAKSIAKSLGRKFVRISLGGRIIQGMKKAGKLNPVFLLDEIDKMSAMLEVLDPEQNSSFSDHYIEETFDLSKVLFIATANNLATIPGPLRDRMEIINIAGYT---EIEKLEIVKDHLLPKQIKEHGLKKSN------LQLR-DQAILDIIRYYTREAGVRSLERQLAAICRKAAKAIVAE--ERKRITVTEKNLQDFIGKRIFRYGQAETEDQVGVVTGLAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFS--YVRSKTEELGIEPDFHEKYDIHIHVPEG--AVPKDGPAAGITMATALVSALTGRAVSREVGMTG---EITLRGRVLPIGGLKEKALGAHRAGLTTIIAPKDNEKDIEDIPESVREGLTFILASHLDEVLEHALV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M6A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -331586 for 3408 contacts (-97.3/contact) +
2D Compatibility (PS) -45336 + (NN) 4928 + (LL) 1440
1D Compatibility (HY) 0 + (ID) 3650
Total energy: -374204.0 ( -109.80 by residue)
QMean score : 0.182
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