Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MTDANPAFDTVHPSGHILVRSCRGGYMHSVSLSEAAM--ETDAETLAEAILLTADVSCLKALLEVRNEIVAAGHTPSAQVP---TTDDLNVAIEKLLAHQLRRRNR------------
3CTW Chain:B ((17-147))
IQDFARSELFDRTFEEGMQLVEETAAYLDGAGRHDSKVLSRNAALGYATESMRLTTRLMQVASWLLVQRAVREGEMPPEAACAEAYAVEELPFGLMNLLQRSERLYERVRHLDRRMYVES
General information:
TITO was launched using:
RESULT:
Template:
3CTW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6826 for 628 contacts (-10.9/contact) +
2D Compatibility (PS) -10807 + (NN) -7061 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -28344.0 ( -45.13 by residue)
QMean score : 0.401
(partial model without unconserved sides chains):
PDB file :
Tito_3CTW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CTW-query.scw
PDB file :
Tito_Scwrl_3CTW.pdb
: