Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVTDEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGR---KLAW-FGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNLTPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQRWLTIAQAFAGPPGRGR |
3DKA Chain:A ((6-141)) | ----NQIVSHFLSHRNVTNELAEKISKDHYSYKPAETSMSAEELVKHILTSFHLFANVIKEGNAS------P------FQ-----N----TETDLNVLAKTYTEKTVAILEQLTEEQLDREID-AFGRKVTGRALLQLAMEHEIHHKGNLFVYVR---------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DKA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40331 for 863 contacts (-46.7/contact) +
2D Compatibility (PS) -13634 + (NN) -9654 + (LL) 8232
1D Compatibility (HY) -4000 + (ID) 550
Total energy: -59937.0 ( -69.45 by residue)
QMean score : 0.427
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