Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSFDVVFVGHR-RGEVRSDNAMLGLLCDAAFDEL--TRPDVVIFPGGIGTR-TLIHDQTVLDWVREAHRHTLLTTSVCTG-GLVLAAAGLLNGLTATTHWRVQDLFNSLGARYV-PQRVVEHLPERVITAAGVSSGIDMGLRLVELLVSREAA-EASQLMIEYDPQPPVDAGSLAKASPATHRLALEFYQHRL
4K2H Chain:A ((32-188))
---IDVETLACAESRAVVSY-HDIPMVADSTLSERQQALFDAVVLPGGPQGSANLAANPAVIAFVARHDAAGKLICPIASAAARVLGAHGLLKGRRYVCSGDLW---KAVPEGVYVDAPVVE--DGNLISGKGLGHVFDFALTLSARLLGDDAPVREQAEHIYYPW----------------------------
General information:
TITO was launched using:
RESULT:
Template:
4K2H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89560 for 1117 contacts (-80.2/contact) +
2D Compatibility (PS) -16643 + (NN) -7755 + (LL) 2276
1D Compatibility (HY) -8800 + (ID) 1700
Total energy: -122182.0 ( -109.38 by residue)
QMean score : 0.426
(partial model without unconserved sides chains):
PDB file :
Tito_4K2H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4K2H-query.scw
PDB file :
Tito_Scwrl_4K2H.pdb
: