Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDSIFNLLTEEQLRGRNTLKWNYF--GPDVVPLWLAEMDFPTAPAVLDGVRACVDNEEFGYPPLGE-DSLPRATADWCRQRYGWCPRPDWVRVVPDVLKGMEVVVEFLTRPESPVALPVPAYMPFFDVLHVTGRQRVEVPMVQQDSGRYLLDLDALQAAFV-RGAGSVIICNPNNPLGTAFTEAELRAIVDIAARHGARVIADEIWAPVVYG-SRHVAAASVSEAAAEVVVTLVSASKGWNLPGLMCAQVILSNRRDAHDWDRINM-LHRMGASTVGIRANIAAYHHGESWLDELLPYLRANRDHLARALPELAPGVEVNAPDGTYLSWVDFRALAL-PSEPAEYLLSKAKVALSPGIPFGAAVGSGFARLNFATTRAILDRAIEAIAAALRDIID |
| 3L8A Chain:A ((38-419)) | -----YDFTTRPDRLNQFTYKWKTSENNPELLQMWVADMDFLPVPEIKEAIINYGREHIFGYN--YFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQI-INGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEA-KTKIKVMEPEGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGK-EGKYFARLNVATPKNTVQEALSRIISVF----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -269575 for 3371 contacts (-80.0/contact) +
2D Compatibility (PS) -40712 + (NN) -19751 + (LL) 1260
1D Compatibility (HY) -22800 + (ID) 4800
Total energy: -356378.0 ( -105.72 by residue)
QMean score : 0.467
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