Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVTVGVICAIPQELAYLRGVLVDAKRQQVAQILFDSGQLDAHRVVLAAAGMGKVNTGLTATLLADRFGCRTIVFTGVAGGLDPELCIGDIVIADRVVQHDFGLLTDERLRPYQPGHIPFIEPTERLGYPVDPAVIDRVKHRLDGFTLAPLSTAAGGGGRQPRIYYGTILTGDQYLHCERTRNRLHHE-LGGMAVEMEGGAVAQICASFDIPWLVIRALSDLAGADSGVDFNRFVGEVAASSARVLLRLLPVLTAC
4KN5 Chain:A ((22-252))
-SMRYGVINAMAEEKAALVDAMIDEKKTTIAGKLFHHGKIGHVDVVVVESGIGKVASALTTTLLITNFGVDAVINSGSAGALGTDLRIGDIVIADYLAYADADARAFG----YAYGQVPQQP----ARFKADTDLSNDLSESYEK-------------VTDARLVRGLVVTSDSFIASNEQKQTILTHFPEAQSAEMEGASIAQVANYFDVPFAVVRAISDNANGEAGMTFDDFIVEAGQQSAQVLINFFEAQ---
General information:
TITO was launched using:
RESULT:
Template:
4KN5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -205974 for 1964 contacts (-104.9/contact) +
2D Compatibility (PS) -24572 + (NN) -7117 + (LL) 1148
1D Compatibility (HY) -13600 + (ID) 3550
Total energy: -253665.0 ( -129.16 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_4KN5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KN5-query.scw
PDB file :
Tito_Scwrl_4KN5.pdb
: