Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRYLPVSTRRIWVNPLCHFSFTVISGALFVSARRYDSNMLANSREELVEVFDALDADLDRLDEVSFEVLSTPERLRSLERLECLARRLPAAQHTLINQLDTQASEEELGGTLCC--ALANRLRITKPEAGRRSAEAKP------
5IE9 Chain:A ((1-103))
-----------------------------------------MEAKTMKDMQKEVDAYIGQFKEGYFS---------PLAMMARLTEEMGELAREVNHYYGERSIEEELGDVLFVMICMANSLNIDLETAHNIVMNKFNTRDKDR
General information:
TITO was launched using:
RESULT:
Template:
5IE9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1347 for 463 contacts (2.9/contact) +
2D Compatibility (PS) -9304 + (NN) -3338 + (LL) 4072
1D Compatibility (HY) -5600 + (ID) 850
Total energy: -13673.0 ( -29.53 by residue)
QMean score : 0.417
(partial model without unconserved sides chains):
PDB file :
Tito_5IE9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5IE9-query.scw
PDB file :
Tito_Scwrl_5IE9.pdb
: