Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVGPVGHQCAECVREGARAVRQPRTPFGGRQRSATPVVTYTLISLNALVFVMQVT--VMGLERQLALWPPAVASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGALYAVSALGGSVLVYLIAPLNTATAGASGAVFGLFGATFMVARR-------LHLDVRWVVALIVINLAFTFLAPAISWQGHVGGLVTGALVAATYVYAPRERRNLIQATVTITVLVAFVVLIGWRTVDLLALFGGRLNLS
2IC8 Chain:A ((1-182))
---------------------------------ERAGPVTWVMMIACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSGYVQQKFSG--PWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALIWIVAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSLNA-----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2IC8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -157826 for 1404 contacts (-112.4/contact) +
2D Compatibility (PS) -17616 + (NN) -5708 + (LL) 6008
1D Compatibility (HY) -13600 + (ID) 1750
Total energy: -190492.0 ( -135.68 by residue)
QMean score : 0.247
(partial model without unconserved sides chains):
PDB file :
Tito_2IC8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IC8-query.scw
PDB file :
Tito_Scwrl_2IC8.pdb
: