Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAILRGRAPLRLGLGGGGTDVEPYSSQFGGRILSVTIDKYAYAFAERGTGDEIAFRSPDRDRAGQASIDDLASL-EEDFPLHVAVYRRVIAEFNGGTPFPLQLATQVDAPPGSGLGSSSALVVAMLLTTCALIGSSPGPYELARLAWEIERVDLGMAGGWQDHYAAAFGGFNFMESRPNGEVVVNPLRIRREVIAELEASLLLYFGGVSRLSSEVIADQQRNVVERDADALAATHSICAEALEMKDLLVVGDIPGFADSLLRGWQAKKRTSTRISNPAIEHAYQVAQSSGMVAGKVSGAGGGGFLMMIVDPRRRIEVARSLERECGGSVAPCLFTKGGAVTWHIPESTAPVRRGVADAVASALGNAGILLCAGCVLATSHSTWRVPV |
4HAC Chain:A ((20-320)) | -HMVSCSAPGKIYLFGEHAVV------YGETAIACAVELRTRVRAELNDSI--TIQSQ-IGR---T------GLDFEKHPYVSAVIEKMRKSI-P-I-NGVFLTVDSDIPVGSGLGSSAAVTIASIGALNELFGFGLSLQEIAKLGHEIEIKVQGAAS-PTDTYVSTFGGVVTIPERR-------KLKT-------PDCGIVIGDTGVFSSTKELVANVRQLRESYPDLIEPLMTSIGKISRIGEQLVLSGDYASIGRLMNVNQGLLDAL--GVNILELSQLIYSARAAGAFGAKITGAGGGGCMVALTAPEKCNQVAEAVAG-AGGKVTITKPTEQGLKV---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HAC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189438 for 2778 contacts (-68.2/contact) +
2D Compatibility (PS) -33484 + (NN) -23668 + (LL) 4968
1D Compatibility (HY) -4800 + (ID) 3500
Total energy: -249922.0 ( -89.96 by residue)
QMean score : 0.488
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