Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTPQARPARRADVRELSRTMARAFYDDPVMSWLLSNDNARTARLTRLFATIVRHQHLAGGGVEVARGAAGIGGAALWDPPDRWRESRRQQLAMTPGFLRVFGFRTAKARAALDVMMRVHPEEPHWYLAAIGSDPTVRGQGFGQVLMRSRLDRCDAE-HCPAYLESTKPENVPYYQRFGFRVTREIALPDAGPPLWAMWREPR
1CJW Chain:A ((4-164))PANEFRCLTPEDAAGVFEIEREAFISVSGNC---PL---NLDEVQHFLT----L---CPELSLGWFVEGRLVAFIIGSLWDEERLTQ--------ES-----------------LALHRPRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGAQPAVRRAVLMCEDALVPFYQRFGFHPAGPCAIVVGSLTFTEMHC---


General information:
TITO was launched using:
RESULT:

Template: 1CJW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45846 for 1246 contacts (-36.8/contact) +
2D Compatibility (PS) -16690 + (NN) -6163 + (LL) 3972
1D Compatibility (HY) -3600 + (ID) 1350
Total energy: -69677.0 ( -55.92 by residue)
QMean score : 0.355

(partial model without unconserved sides chains):
PDB file : Tito_1CJW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1CJW-query.scw
PDB file : Tito_Scwrl_1CJW.pdb: