Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEVVTAAPAPPVVRLPPAV-RGPKLFQGLAFVV-SRRRLLGRFVRRYGKAFTANILMYGRVVVVADPQLARQVFTSSPEELGNIQPN-LSRMF--GS--GSVF-ALDGDDHRRRRRLLAPPFHGKSM--KNYETIIEEETLRETANWP--QGQAFATLPSMMHITLNAILRAIFGAGGSELD-ELRRLIPPWVTL---GSRL-AALPKPKRDYGRLSP-WGRLAEWRRQYDTVIDKLIEAERADPNF-ADRTDVLALMLRSTY----DDGSIMSRKDIGDELLTLLAAGHETTAATLGWAFERLSRHPDVLAALVEEVDNGG-------------HELRQAAILEVQRARTVIDFAA-RRVNPPVYQLGEWVIPRGYSIIINIAQIHGDPDVFPQPDRFDPQRYIGSKP---SPFAWIPFGGGTRRCVGAAFANMEMDVVLRTVLRHFTLETTTAAGERSHGRGVAFTPKDGGRVVMRRR |
| 3TBG Chain:A ((9-449)) | -------------GKLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAW-TPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSR-DIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTG------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194292 for 3196 contacts (-60.8/contact) +
2D Compatibility (PS) -44022 + (NN) -24262 + (LL) 1840
1D Compatibility (HY) -22000 + (ID) 4600
Total energy: -287336.0 ( -89.90 by residue)
QMean score : 0.519
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