Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MRSIDVVVEAVVTFAGAAGFA--------HTLAPLRRGQQDPCFRVPGDGTIW-----------RTSLLPTGPVTARISRAGRDAARC-----VAWGSGAEEFV----DMAPAMLGAADDASDFVPLHPAVAAAHRRLPNLRLGRTGQVLEALIPA----VIEQRVPGADAFRSWRLLVSKYGTQAPGPAPPGMRVPPSAEVWRHIPSWEFHRANVDPGRARAVVGCAQRAA-SLERLVSLPAARAAEALTSLPGVGVWTAAETTQRVFGDADAVSVGDYHIPKMIGWTLVGRPVDDAGMLELLEPMRPHRHRVVRLLEASGLAREPRRGPRLPVQNIRAL |
| 4RKS Chain:A ((21-337)) | TYRSIGSTAYPTIGVVLLGGIANPVTRTPLHTSAGIAYS--DSCGSIRSETRIYADEATHIYFNGTESTDDNRSVRRVLDRYSSVFEEAFGTKTVSYSSQNFGILSGSSDAGAASIGAAILGLKPDLDPHDVENDLRAVSE-SAGRSLFGGLTITWSDGFHAYTEKILDPEAFSGYSIVAFAFDYQRN----------PSDVIHQNIVRSDLYPARKKHADEHAHMIKEYAKTNDIKGIFDLAQEDTEEYHSILRGVGVNVIRENMQKLISYLKLIRKDYWNAYIVTGGSNVYVAVESENADRLFSIENTFG-SKKKMLRIVGGAWHRRPE----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RKS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52086 for 2411 contacts (-21.6/contact) +
2D Compatibility (PS) -30050 + (NN) -2442 + (LL) 1052
1D Compatibility (HY) -4400 + (ID) 2500
Total energy: -90426.0 ( -37.51 by residue)
QMean score : 0.189
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