Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------------MALSIKHPEADRLARALAARTGETLTEAVVTALRERLARETGRARVVPLRDELAAI---RHRCAALPVVDNRSAEAILGYDERGLPA----------------------------------
3H16 Chain:A ((18-153))
APPHDIFISHAWEDKADFVEALAHTLRAAGAEVWYDDFSLRPGDSLRRSIDKGL------GSSRFGIVVLSTHFFKKEWPQKELDGLFQLESSGRSRILPIWHKVSKDEVASFSPTMADKLAFNTSTKSVDEIVADLMAIIR
General information:
TITO was launched using:
RESULT:
Template:
3H16.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20482 for 408 contacts (-50.2/contact) +
2D Compatibility (PS) -7904 + (NN) -2627 + (LL) 724
1D Compatibility (HY) -4800 + (ID) 600
Total energy: -35689.0 ( -87.47 by residue)
QMean score : 0.381
(partial model without unconserved sides chains):
PDB file :
Tito_3H16.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H16-query.scw
PDB file :
Tito_Scwrl_3H16.pdb
: