Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSARGGSLHGRVAFVTGAARAQGRSHAVRLAREGADIVALDICAPVSGSVTYPPATSEDLGETVRAVEAEGRKVLAREVDIRDDAELRRLVADGVEQFGRLDIVVANAGVLGWGR-LWELTDEQWETVIGVNLTGTWRTLRATVPAMIDAGNGGSIVVVSSSAGLKATPGNGHYAASKHALVALTNTLAIELGEFGIRVNSIHPYSVDTPMIEPEAMIQTF---AKHPGYVHSFPP----MPLQPKGFMTPDEISDVVVWLAGDGSGALSGNQIPVDKGALKY |
5EJ2 Chain:D ((33-306)) | -----GRVAGKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIE-NLAYPHSTPEDLAETADLVKDLDRRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNVWQDMIDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHYIAAKHGVIGLMRAFAVELGPHMIRVNAVLPTQVSTTMVMNDQTFRLFRPDLENPGP-DDFAPISQMMHTLPVPWVDASDISNAVLFLASDESRYVTGVSLPVDAGSL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5EJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142978 for 2397 contacts (-59.6/contact) +
2D Compatibility (PS) -28382 + (NN) -8535 + (LL) 428
1D Compatibility (HY) -23600 + (ID) 6300
Total energy: -209367.0 ( -87.35 by residue)
QMean score : 0.550
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