Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSPVAVIARFMPRPDARSALRALLDAMITPTRAEDGCRSYDLYESADGGELVLFERYRSRIALDEHRGSPHYLNYRAQVGELLTRPVAVTVLAPLDEASA
3FGV Chain:A ((13-105))
--MREVVIVKSTPQRGKFNAFAELVGKLVSETRDFPGCLGAYLMLAPERNEQVVMHIWETPDALEAYLTWRADRGDFLEINEYLEVEQDFKTYQL------
General information:
TITO was launched using:
RESULT:
Template:
3FGV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42692 for 622 contacts (-68.6/contact) +
2D Compatibility (PS) -10331 + (NN) -5701 + (LL) 724
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -62400.0 ( -100.32 by residue)
QMean score : 0.413
(partial model without unconserved sides chains):
PDB file :
Tito_3FGV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FGV-query.scw
PDB file :
Tito_Scwrl_3FGV.pdb
: