Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRRRAIQPSPALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLY----------------VCEMVTARALIERHPV-TM-HMTT---FSADESPRSLQLYTVDPDTTYAAARMIAG-EGLADHIDMNFGCPVPKVTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALHARTAA---------Q-------RYSGT----ADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRKHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVALPDGWLTDPDDCRVPEGADAMGSGG |
| 1EP3 Chain:A ((4-287)) | -------NNRLSVKLPGLDLKNPIIPASGCFGFGEEYAKYYDLNKLGSIMV--KATTLHPRFGNPTPRVAETASGMLNAIGLQNPGLEVIMTEKLPWLNENFPELPIIANVAGSEEADYVAVCAKIGDAAN-VKAIELNISCPNVK----HGGQAFGTDPEVAAALVKACKAV---SKVPLYVKLSPNVT----DIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV-DIPIIGMGGVANAQDVLEMYM-AGASAVAVGTANFADPFVCPKIIDKL---------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127576 for 2142 contacts (-59.6/contact) +
2D Compatibility (PS) -26115 + (NN) -7695 + (LL) 6584
1D Compatibility (HY) -10400 + (ID) 2250
Total energy: -167452.0 ( -78.18 by residue)
QMean score : 0.407
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