Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------------------------------------------------------------------------MVG-DCPRSRTVRWSWDTGHVTAEPQPTPRPAKPRLLQDG-RDMFWSLA--PLVVGCILLAGLVGMCSFQLGGTKRGPIPSYDAAQALRADAKTLGFPIRLPQLPGGWTPNSGGRGGIENGRADPATGQRRNAATSIVGFISPTGRYLSLTQSNADEDKLVGSIHPSMYPTGTVDVGGTRWVVYEGSDENGAVEPVWTTRLTGPGGATQLAITGAGSIDQFRTLASATQSQPPLPAR---------------------------------------------------------------- |
4P5F Chain:A ((8-374)) | LTPTEAAVLRELRLHRPQLPLDTLLFTDPNKDPDDVVTYTIAKQLQADGFLRLTDVVVTLGDADMRSQRAQLAKGVFDRLALPDVRVARGQDYPMTSTQAREHSKFLAEGAAL---RAAPDAVHTDGVRAMCERLATSPHKLGMVVIAGM------------------TDASALLAEAGDLVREKVASITIMGGIDPARDADGLVQPDTRAYNNATDIHAARALYRRAQQLGIPLRILTKEAAYKAAV----PPAFYEGIARNGHPVGEYLRDVQKN-ALKGLWEGIQANL-------IPGLDTAWFFRTFVAGALSFDAIWPQVTKLNLYDPLTLLAALPGTARLLFQPTPMHREGASPVEHVGHAEVVRPEKARLLLSALAKAALV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P5F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39446 for 1306 contacts (-30.2/contact) +
2D Compatibility (PS) -21482 + (NN) -6152 + (LL) 220
1D Compatibility (HY) -3200 + (ID) 2050
Total energy: -72110.0 ( -55.21 by residue)
QMean score : 0.187
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