Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTTLTLDDDVVRLVEDAVHRERRPMKQVINDALRRALAPPVKRQEQYRLEPHESAVRSGLDLAGFNKLADELEDEALLDATRRAR
2AY0 Chain:A ((4-45))
TTMGVMLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLE--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2AY0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15933 for 196 contacts (-81.3/contact) +
2D Compatibility (PS) -4692 + (NN) -4198 + (LL) 3276
1D Compatibility (HY) 0 + (ID) 450
Total energy: -21997.0 ( -112.23 by residue)
QMean score : 0.844
(partial model without unconserved sides chains):
PDB file :
Tito_2AY0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AY0-query.scw
PDB file :
Tito_Scwrl_2AY0.pdb
: