Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWRYPLSTRLALPNTPGVASFAMTSSPSTVSTTLLSILRDDLNIDLTRVTPDARLVDDVGLDSVAFAVGMVAIEERLGVALSEEELLTCDTVGELEAAIAAKYRDE
2N50 Chain:A ((5-77))
----------------------------EVLQKVAKIISNHFDIEADQVTDQLNIKDDLNADSISVMEFVLELEDEFGTEISDEDAEKIETVGAAVDYIVS-----
General information:
TITO was launched using:
RESULT:
Template:
2N50.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50746 for 493 contacts (-102.9/contact) +
2D Compatibility (PS) -7389 + (NN) 59 + (LL) 1636
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -61290.0 ( -124.32 by residue)
QMean score : 0.710
(partial model without unconserved sides chains):
PDB file :
Tito_2N50.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2N50-query.scw
PDB file :
Tito_Scwrl_2N50.pdb
: