Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEPTVARPDIDPVLKMLLDTFPVTFTAADGVEVARARLRQLK--TPPELLPELRIEERTV-GYDGLTDIPVRVYWPPVVRDNLPVVVYYHGGGWSLGGLDTHDPVARAHAVGAQAIVVSVDYRLAPEHPYPAGIDDSWAALRWVGENAAELGGDPSRIAVAGDSAGGNISAVMAQLARDVGGPPLVFQLLWYPTTMADLSLPSFTENADAPILDRDVIDAFLAWYVPGLDISDHTMLPTTLAPGNADLSGLPPAFIGTAEHDPLRDDGACYAELLTAAGVSVELSNEPTMVHGYVNFALVVPAAAEATGRGLAALKRALHA |
3AIK Chain:B ((41-322)) | -----------------------------ASVEEIRSLFKQFSSLTPREEVG--KIEDITIPGSE--TNIKARVYYPKT-QGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSEKFNGKYG-IAVGGDSAGGNLAAVTAILSKK-ENIKLKYQVLIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLR----SFADLLDFRFSPILADLNDLPPALIITAEHDPLRDQGEAYANKLLQSGVQVTSVRFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFYG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AIK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153361 for 2557 contacts (-60.0/contact) +
2D Compatibility (PS) -30570 + (NN) -16433 + (LL) 3060
1D Compatibility (HY) -21200 + (ID) 5700
Total energy: -224204.0 ( -87.68 by residue)
QMean score : 0.559
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