Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDHKVPFNRPYMTGR----ELAYIAE----AHSCGHLAGDGPFTRRSHAWLEQQTGCRKALLTPSCTAALEMMALLLDIEEGDEVILPSYTFVSTANAFVLRGGVPVFVDIRPDTLNIDETRIVDAITPRTKAIVPVHYAGVACEMDAIMKIATHHNLAVVEDAAQGAMASYRGRALGSIGDLGALSFHETKNVISGEGGALLVNS
2PO3 Chain:B ((17-213))
-------FDQPLLVGRPNRIDRARLYERLDRALDSQWLSNGGPLVREFEERVAGLAGVRHAVATCNATAGLQLLAHAAGLT--GEVIMPSMTFAATPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVTPRTSAVVGVHLWGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGRPAGSLGDAEVFSFHATKAVNAFEGGAVVTD-
General information:
TITO was launched using:
RESULT:
Template:
2PO3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122746 for 1523 contacts (-80.6/contact) +
2D Compatibility (PS) -20546 + (NN) -9872 + (LL) 168
1D Compatibility (HY) -8000 + (ID) 3700
Total energy: -164696.0 ( -108.14 by residue)
QMean score : 0.353
(partial model without unconserved sides chains):
PDB file :
Tito_2PO3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PO3-query.scw
PDB file :
Tito_Scwrl_2PO3.pdb
: