Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSPATVLDSILEGVRADVAAREASVSLSEIKAAAAAAPPPLDVMAALREPGIGVIAEVKRASPSAGALATIADPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALKA-GAKVIGVNARDLMTLDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTSGDPRAAVADLVTAGTHPSCPKPAR |
1I4N Chain:A ((41-246)) | ---------------------------------------------------VKIIAEFKKASPSAGDINADASLEDFIRMY-DELADAISILTEKHYFKGDPAFVRAARNLTCRPILAKDFYIDTVQVKLASSVGADAILIIARILTAEQIKEIYEAAEELGMDSLVEVHSREDLEKVFSVIRPKIIGINTRDLDTFEIKKNVLWELLPLVPDDTVVVAESGIKDPRELKDLRGK-VNAVLVGTSIMKAENPRRFLEEM-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I4N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114989 for 1598 contacts (-72.0/contact) +
2D Compatibility (PS) -21928 + (NN) -6044 + (LL) 4132
1D Compatibility (HY) -16800 + (ID) 3300
Total energy: -158929.0 ( -99.45 by residue)
QMean score : 0.567
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