Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAARKCGAPPIAADGSTRRPDCVTAVRTQARAPTQHYAESVARRQRVLTITAWLAVVVTGSFALMQLATGAGGWYIALINVFTAVTFAIVPLLHRFGGLVAPLTFIGTAYVAIFAIGWDVGTDAGAQFFFLVAAALVVLLVGIEHTALAVGLAAVAAGLVIALEFLVPPDTGLQPPWAMSVSFVLTTVSACGVAVATVWFALRDTARAEAVMEAEHDRSEALLANMLPASIAERLKEPERNIIADKYDEASVLFADIVGF----TERASSTAPADLVRFLDRLYSAFDELVDQ---HGLEKIKVSGDSYMVVSGVPR-PRPDHTQ-------ALADFALDMTNVAAQLKDPRGNPVPLRVGLATGPVVAGVVGSRRFFYDVWGDAVNVASRMESTDSVGQIQVPDEVYERLKD-DFVLRERGHINVKGKGVMRTWYLIGRKVAADPGEVRGAEPRTAGV |
| 2GVZ Chain:B ((11-206)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKTIGSTYMAATGLSAI-------RQYMHIGTMVEFAYALVGKLDAINKHSFNDFKLRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTLGYTCTCRGIINVKGKGDLKTYFV---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GVZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99266 for 1264 contacts (-78.5/contact) +
2D Compatibility (PS) -18725 + (NN) -9272 + (LL) 22936
1D Compatibility (HY) -16000 + (ID) 3250
Total energy: -123577.0 ( -97.77 by residue)
QMean score : 0.577
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