Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIRHFLRDDDLSPAEQAEVLELAAELKKDPVSRR---PLQGPRGVAVIFDKNSTRTRFSFELGIAQLGGHAVVVDSGSTQLGRDETLQDTAKVLSRYVDAIVWRTFGQERLDAMASVATVPVINALSDEFHPCQVLADLQTIAER--KGALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTWTSMGQENDGL-DRVKPFRPFQLNSRLLAL-ADSDAIVLHCLPA------------------HRGDEITDAVMDGPASAVWDEAENRLHAQKALLVWLLERS |
1DUV Chain:H ((6-333)) | --KHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTG-KNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYASVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DUV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159020 for 2683 contacts (-59.3/contact) +
2D Compatibility (PS) -33812 + (NN) -25615 + (LL) 244
1D Compatibility (HY) -27200 + (ID) 6150
Total energy: -251553.0 ( -93.76 by residue)
QMean score : 0.547
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