Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSIAQEHDCLLIDLDGTVFCGRQPTGGA---VQSLSQVRSRKLFVTNNASRSADEVAAHLCELGFTAT-GEDVVTSAQSAAHLLAGQLA--PGARVLIVGTEALANEVAAVGLRPVRRFED---------------RPD--AVVQGLSMTTGWSDLAEAALAIRA-GALWVAANVDPTLPTERG-LLPGNGSMVAALRTATGMDPRVAGKPAPALMTEAVARGDFRA----ALVVGDRLDTDIEGANAAGLPSLMVLTGVNSAWDAVYAEPVRRPTYIGHDLRSLHQDSKLLAVAPQPGWQIDVGGGAVTVCANGDVDDLEFIDDGLSIVRAVASAVWEARAADLHQRPLRIEAGDERARAALQRWSLMRSDHPVTSVGTQ |
| 4BKM Chain:B ((16-280)) | LRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRLAGVPDPKAYVLGSPALAAELEAVGVTSVGVGPDVLHGDGPSDWLAVPLEPDVRAVVVGFDPHFSYMKLTKAVRYLQQPDCLLVGTNMDNRLPLENGRFIAGTGCLVRAVEMAAQRQADIIGKPSP-YMFQCITE-DFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEA------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BKM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105748 for 1986 contacts (-53.2/contact) +
2D Compatibility (PS) -26516 + (NN) -14693 + (LL) 7552
1D Compatibility (HY) -20000 + (ID) 4200
Total energy: -163605.0 ( -82.38 by residue)
QMean score : 0.569
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