Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTLTVADFALRLAVGVGCGAIIGLERQWRARMAGLRTNALVATGATLFVLYAVATEDSSP--TRVASYVVSGIGFLGGGVILREGFNVR---GLNTAATLWCSAAVGVLAASGHLVFTLIGTGTIVAVHLLGRPLGRLVDRDNAVEDEGLQPYQVRVICRPKAETYVRAHIVQRTSSNDITLRGIRTGPAGDDNITLTAHLLMVGHTPAKLERLVAELSLQPGVYAVHWYAGEHAQAE
1K45 Chain:A ((1-168))
MLVANINGGFESTPAGVVTDLAEGVEG-WDLNVGSSVTNPP---------VFEVLETSDAPEGNKVLAVTVNGVGN-NPWDIEATAFPVNVRPGVTYTYTIWARAEQD-----GAVVSFTVGNQSFQE---YGRLHEQQITTEW-------QPFTFEFTVSDQ-ETVIRAPIHF--------------GYAANVGNTIYIDGLAIASQP------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1K45.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115068 for 1343 contacts (-85.7/contact) +
2D Compatibility (PS) -17756 + (NN) -5550 + (LL) 6400
1D Compatibility (HY) -3600 + (ID) 1900
Total energy: -137474.0 ( -102.36 by residue)
QMean score : 0.258
(partial model without unconserved sides chains):
PDB file :
Tito_1K45.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K45-query.scw
PDB file :
Tito_Scwrl_1K45.pdb
: