Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------MVLSRTSTGRVILVPTQ--LRFDRWF----LPLAVPLGLGPKNSELWVGAGSLHVKM-------GWAFAA--DIPLT----SITKAEATNARVYAAGVHFGFGRWLV--NGSRKGLVALTID---PPEQAKMWKKS---MTVRELWVSVT-DPDALVTACTAK------------------------------------------------------------------- |
| 3G8Q Chain:A ((1-278)) | MKVSLAGQTVDVKKILNEIPKRTVTAALLEGGEIVAVEEADDEHAERKLVRRHDVEGKVVFVTARPCLYCARELAEAGVAGVVYLGRGRGLGPYYLARSGVEVVEVHPDEPLGYDPVDRLDVLLTFGGNPYLTEEDVAARVYCLLTGRGFDADIAPAPENLSGRVEIMVTRGDPDEAVELLKEELPVFRIRRFLISGEFDRDELRERILEDIEPRILDPFAVRARIARAGAFSSSREAEVFIGDVLTSVGREVNLNDPRTVVTVDVLGPRVSVGVEKR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3G8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -58737 for 898 contacts (-65.4/contact) +
2D Compatibility (PS) -15175 + (NN) -7052 + (LL) 0
1D Compatibility (HY) -9600 + (ID) 1600
Total energy: -92164.0 ( -102.63 by residue)
QMean score : 0.256
|
|
|