Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADRVLRGSRLGAVSYETDRNHDLAPRQIARYRTDNGE--EFEVPFADDAEIPGTWLCR-NGMEGTLIEGDLPEPKKVKPPRTHWDMLLERRSIEELEELLKERLELIRSRRRG
1HA9 Chain:A ((1-34))
-------------------------------SGSDGGVCPKILKKCRRDSDCPGACICRGNGYCG-------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1HA9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1323 for 164 contacts (-8.1/contact) +
2D Compatibility (PS) -3289 + (NN) -2708 + (LL) 5844
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -3976.0 ( -24.24 by residue)
QMean score : -0.023
(partial model without unconserved sides chains):
PDB file :
Tito_1HA9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HA9-query.scw
PDB file :
Tito_Scwrl_1HA9.pdb
: