Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------MNSHCSHTFITDNRSPRARRGH----------AMSTLHKVKAYFGMA----PMEDYDDEYYDDRAPSRGYARPRFD---DDYGRYDGRDYDDARSDS-----------RGDLRGEPADYPPPGYRGGYADEPRFRPREFDRAEMTRPRFGSWLRNSTRGALAMDPRRM--AMMFEDGHPLSKITTLRPK-DYSEARTIGERFRDGSPV-----IMDLVSMDNADAKRLVDFAAGLAFALRGSFDKVATKVFLLSPADVDVSPEERRRIAETGFYAYQ------------------------------- |
| 4V12 Chain:A ((7-343)) | DTSTLESRVGHYYQMEDTYLVGREKVREFARAVQDYHPAHW----NLATAADLGHPGLIAPLTFTSAPAMACNQRMFESVVVGYDMYLQTEEVFEQHRPIVEGDELSIDIELTSVRRIAGRDLITVTNTFTDTAGEVVHTLHTTVVGITAEDVDPAIRPAVQGVMMHGINMLGVEETNAPYEKTVRPEGELRIAQGGATRTPTSLNFDDLKVGEELPVHTARLSRGDLVNYAGVAGDANPLHWDENIAKLAGQPDVIAHGMLTMGLGAGFVSSWSGDPGAITRYAVRLSQPAVVPAEGTEIEYSGRIKSLDPETRTGVVIVAAKSGGRKIFGLATATIRFS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4V12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 37967 for 1474 contacts (25.8/contact) +
2D Compatibility (PS) -23955 + (NN) -4841 + (LL) 312
1D Compatibility (HY) 400 + (ID) 1950
Total energy: 7933.0 ( 5.38 by residue)
QMean score : ?
|
|
|