Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPGRAPGSTLARVGSIPAGDDVLDPDEPTYDLPRVAELLGVPVSKVAQQLREGHLVAVRR-AGGVVIPQVFFTNSGQVVKSLPGLLTILHDGGYRDTEIMRWLFTPDPSLTITRDGSRDAVSNARPVDALHAHQAREVVRRAQAMAY
3UCS Chain:A ((3-51))
------------------------TVTVTFTITELCLRTGVSEEELTEIVGLGMIEPHQPQADTWLFDDSAVT--------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3UCS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34683 for 279 contacts (-124.3/contact) +
2D Compatibility (PS) -5074 + (NN) 1649 + (LL) 5124
1D Compatibility (HY) -1600 + (ID) 300
Total energy: -34884.0 ( -125.03 by residue)
QMean score : 0.683
(partial model without unconserved sides chains):
PDB file :
Tito_3UCS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UCS-query.scw
PDB file :
Tito_Scwrl_3UCS.pdb
: