Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------MGQIVAGEIGGQRTTPVGGGLPLACCLDGRPP---IVPHRRRRRIAALRSVLRMRDT-----PRPARSRCDQVTSHAVLIGWRAVPRRHGGELPRRGALALGCIALLLMG------IVGCTTVTDGTAMPDTNVAPAYRSSVSA--SVSASAATSSIRESQRQQSLTTKAIRTSCDALAAT-----SKDAIDKVNAYVAAFNQGRNTGPTEGPAIDALNNSASTVSGSLSAALS-------AQLGDALNAYVDAARAVANAIGAHASTAEFNRRVDRLNDTKTKALTMCVAAF--------------------------------------------------------- |
| 2RAJ Chain:A ((11-392)) | PGTEQYLLAKQLAKPKEKIPIIVGDYGPMWVYPTSTFDCVVADPRKGSKMYGLKSYIEYQLTPTNTNRSVNHRYKHFDWLYERLLVKFGSAIPIPSLPDKQVTGRFEEEFIKMRMERLQAWMTRMCRHPVISESEVFQQFLNFRDEKEWKTGKRKAERDELAGVMIFSTMEPEAPDLDLVEIEQKCEAVGKFTKAMDDGVKELLTVGQEHWKRCTGPLPKEYQKIGKALQSLATVFSSSGYQGETDLNDAITEAGKTYEEIASLVAEQPKKDLHFLMECNHEYKGFLGCFPDIIGTHKGAIEKVKESDKLVATSKITLQDKQNMVKRVSIMSYALQAEMNHFHSNRIYDYNSVIRLYLEQQVQFYETIAEKLRQALSRFPVM |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25074 for 1599 contacts (-15.7/contact) +
2D Compatibility (PS) -28283 + (NN) -8790 + (LL) 0
1D Compatibility (HY) 400 + (ID) 1300
Total energy: -63047.0 ( -39.43 by residue)
QMean score : 0.217
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