Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSLTLSEASCIASASRWRHIIPAGVVCALIAGIGVGCHGGPSDVVGRAGPDRAHTSITLVAYAV-PEPGWSAVIPAFNASEQGRGVQVITSYGASADQSRGVADGKPADLVNFSVEPDIARLVKAGKVDK--DW---DAD-------------ATKGIPFG-SVVTFVVRAGNPK-NIRDWDDLLRPGIEVITP--SPLS----SGSAKWNLLAPYAAK-SD--GG-----------RNNQAGIDFVNTLVNEHVKLR-PGSGREATDVFVQGSGDVLISYENEAIATERAGKPVQHV-TPPQ--T----FKIENPLAVVATSTHLGAATAFRN-FQYTVQAQKLWAQ-AGF-RPVDPAVAADFADLFPVPAKLWTIADLGGWGSVDPQLFDKATGSITKIYLRATG |
| 3WOA Chain:A ((37-356)) | -----------------------------VADKMGMGQSGSG--------MKIEEGKLVIWINGDKGYNGLAEVGKKFEKD-TGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAH-DRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDL-IKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKS------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WOA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39040 for 2001 contacts (-19.5/contact) +
2D Compatibility (PS) -29806 + (NN) -17594 + (LL) 6028
1D Compatibility (HY) -6000 + (ID) 1850
Total energy: -88262.0 ( -44.11 by residue)
QMean score : 0.426
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